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dexterdev

molecular-dynamics

9y

Wanna see how a protein interacting with a membrane? (A molecular dynamics simulation)

Wanna see how a protein interacting with a membrane? (A molecular dynamics simulation)

Main aim of this post is to attract questions. So Shoot your questions in comments. I will try answering you and give explanations. May be future articles too!

$ 0.000

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dexterdev

9y

Principal Component Analysis for analyzing molecular dynamics trajectory

Principal Component Analysis for analyzing molecular dynamics trajectory

I wanted to explain the process of implementing PCA (Principal Component Analysis) on your MD (molecular dynamics) trajectories. Here I do it on NAMD generated DCD files. The example files are taken from

$ 5.828

3